Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC134407.2-201ENST00000625089 1978 ntBASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 BTBD7P1-201ENST00000447253 1453 ntBASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KRT8P12-202ENST00000472924 1397 ntBASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 OR2I1P-209ENST00000641730 5365 ntBASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 OSM-203ENST00000403463 464 ntTSL 3 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC244107.1-201ENST00000442033 332 ntBASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SPTLC1P1-201ENST00000447199 261 ntBASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AL033527.5-202ENST00000641632 1098 ntBASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TCRBV4S1A1TA0A5B7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.55□□□□□ -0.4
TCRBV4S1A1TA0A5B7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms