Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AP000812.2-201ENST00000538934 718 ntBASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AC124283.3-201ENST00000570869 594 ntBASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 MIR6787-201ENST00000616675 61 ntBASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.59□□□□□ -0.07
PCDHGA9Q9Y5G4 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.58□□□□□ -0.07
PCDHGA9Q9Y5G4 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGA9Q9Y5G4 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.58□□□□□ -0.07
PCDHGA9Q9Y5G4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
PCDHGA9Q9Y5G4 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
PCDHGA9Q9Y5G4 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.07
PCDHGA9Q9Y5G4 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
PCDHGA9Q9Y5G4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.58□□□□□ -0.07
PCDHGA9Q9Y5G4 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.58□□□□□ -0.07
PCDHGA9Q9Y5G4 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 BRWD1P1-201ENST00000401091 371 ntBASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 AP001889.1-201ENST00000525414 633 ntBASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 AC079316.1-201ENST00000548397 411 ntBASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 KRT8P44-201ENST00000441609 1350 ntBASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PCDHGA9Q9Y5G4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AC099063.4-201ENST00000641099 1602 ntBASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 BCRP2-202ENST00000447763 634 ntBASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
PCDHGA9Q9Y5G4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms