Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC10.65□□□□□ -0.71
LINC00588Q9Y4M8 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 MSTO2P-201ENST00000314835 1709 ntBASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 AL138799.1-201ENST00000448213 1675 ntBASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 BRF1-202ENST00000379932 884 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 AC005229.1-201ENST00000392885 409 ntBASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 AC012441.1-201ENST00000446669 685 ntBASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 MDH2-205ENST00000461263 648 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 GAPDHP40-201ENST00000505218 1006 ntBASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 MIR6775-201ENST00000617557 69 ntBASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 AP005117.1-202ENST00000581724 1908 ntBASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
LINC00588Q9Y4M8 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LINC00588Q9Y4M8 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms