Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ATP6V0A4Q9HBG4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 TMEM14DP-201ENST00000422205 345 ntBASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 AC234783.1-201ENST00000441761 496 ntBASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 AC022210.1-201ENST00000449856 793 ntBASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 VDAC1P7-201ENST00000462417 847 ntBASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 AL512343.1-201ENST00000605837 169 ntBASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 INTS4P2-202ENST00000614726 2019 ntBASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ATP6V0A4Q9HBG4 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 PKD1P5-201ENST00000532415 10291 ntBASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 AC015936.2-201ENST00000593177 259 ntBASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.29■□□□□ 0.36
ATP6V0A4Q9HBG4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.28■□□□□ 0.36
ATP6V0A4Q9HBG4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms