Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 MIR4515-201ENST00000584082 81 ntBASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 AL139288.1-201ENST00000623748 933 ntBASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 AC073439.1-201ENST00000624121 1774 ntBASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 AC006504.4-201ENST00000592118 1568 ntBASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.7□□□□□ -0.22
SLIRPQ9GZT3 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 HMGA1P7-201ENST00000406908 502 ntBASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 ELK2BP-201ENST00000415014 1224 ntBASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 AC092647.4-201ENST00000457211 535 ntBASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 MIR5100-201ENST00000579544 119 ntBASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 MIR4497-201ENST00000583208 89 ntBASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 AC097376.2-205ENST00000610159 5334 ntBASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 AC004241.5-201ENST00000623870 2448 ntBASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SLIRPQ9GZT3 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
SLIRPQ9GZT3 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms