Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AP000344.2-201ENST00000512987 629 ntBASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 AL513210.1-201ENST00000629608 234 ntBASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
AMBRA1Q9C0C7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 EEF1DP4-201ENST00000446006 880 ntBASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 DNAJB3-202ENST00000449667 1266 ntBASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 AC092364.2-202ENST00000597012 1073 ntBASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 AC097359.3-201ENST00000603982 1210 ntBASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 AC105339.1-204ENST00000636249 355 ntBASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 KRT18P28-201ENST00000453838 1332 ntBASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.61□□□□□ -0.07
AMBRA1Q9C0C7 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 AC006504.5-208ENST00000588784 2401 ntBASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 METTL21AP1-201ENST00000438852 635 ntBASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 AL139010.1-201ENST00000454878 894 ntBASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
AMBRA1Q9C0C7 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms