Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 AC008741.2-201ENST00000612792 3115 ntBASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 AC090616.6-203ENST00000579186 1945 ntBASIC16.47■□□□□ 0.23
PAAF1Q9BRP4 CICP11-201ENST00000434745 2827 ntBASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 AL139094.1-201ENST00000405549 1188 ntBASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 MIR1202-201ENST00000408529 83 ntBASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 AC004066.1-201ENST00000502488 802 ntBASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 RN7SL560P-201ENST00000577943 264 ntBASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PAAF1Q9BRP4 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PAAF1Q9BRP4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
PAAF1Q9BRP4 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.46■□□□□ 0.22
PAAF1Q9BRP4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PAAF1Q9BRP4 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 SAMD11P1-201ENST00000571429 661 ntBASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 MIR4741-201ENST00000579822 90 ntBASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PAAF1Q9BRP4 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 AL359258.3-201ENST00000622910 2331 ntBASIC16.44■□□□□ 0.22
PAAF1Q9BRP4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms