Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
USP9XQ93008 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
USP9XQ93008 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.32□□□□□ -0.28
USP9XQ93008 HYMAI-201ENST00000635591 3347 ntBASIC13.32□□□□□ -0.28
USP9XQ93008 AC005915.1-201ENST00000624912 2018 ntBASIC13.32□□□□□ -0.28
USP9XQ93008 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 RN7SKP175-201ENST00000408472 289 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 AC018463.1-201ENST00000456674 917 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.31□□□□□ -0.28
USP9XQ93008 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 AC011676.5-201ENST00000624864 2660 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 LYPLA2P1-203ENST00000447689 696 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC13.31□□□□□ -0.28
USP9XQ93008 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 SNORD3B-2-202ENST00000571722 791 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 PHBP15-201ENST00000574228 665 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 RN7SL163P-201ENST00000583100 276 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 AL157813.1-201ENST00000612996 587 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 AL132780.4-201ENST00000624870 1135 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC13.31□□□□□ -0.28
USP9XQ93008 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC13.31□□□□□ -0.28
USP9XQ93008 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
USP9XQ93008 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 AP001094.4-201ENST00000579008 2176 ntBASIC13.31□□□□□ -0.28
USP9XQ93008 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
USP9XQ93008 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
USP9XQ93008 COX20P1-201ENST00000366529 357 ntBASIC13.3□□□□□ -0.28
USP9XQ93008 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
USP9XQ93008 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USP9XQ93008 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USP9XQ93008 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC13.3□□□□□ -0.28
USP9XQ93008 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC13.3□□□□□ -0.28
USP9XQ93008 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
USP9XQ93008 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USP9XQ93008 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USP9XQ93008 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.3□□□□□ -0.28
USP9XQ93008 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
USP9XQ93008 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
USP9XQ93008 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
USP9XQ93008 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
USP9XQ93008 AC020916.1-201ENST00000587762 1774 ntBASIC13.3□□□□□ -0.28
USP9XQ93008 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.3□□□□□ -0.28
USP9XQ93008 AC011477.6-201ENST00000604980 1927 ntBASIC13.3□□□□□ -0.28
USP9XQ93008 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms