Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.4□□□□□ -0.1
HPS1Q92902 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.4□□□□□ -0.1
HPS1Q92902 RIN3-211ENST00000557762 517 ntTSL 3 BASIC14.4□□□□□ -0.1
HPS1Q92902 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HPS1Q92902 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.4□□□□□ -0.1
HPS1Q92902 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
HPS1Q92902 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.4□□□□□ -0.1
HPS1Q92902 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.4□□□□□ -0.1
HPS1Q92902 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.4□□□□□ -0.1
HPS1Q92902 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HPS1Q92902 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
HPS1Q92902 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HPS1Q92902 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
HPS1Q92902 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.4□□□□□ -0.1
HPS1Q92902 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
HPS1Q92902 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
HPS1Q92902 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
HPS1Q92902 TUBB8P12-201ENST00000308911 1335 ntBASIC14.4□□□□□ -0.1
HPS1Q92902 TUBB7P-202ENST00000428444 1305 ntBASIC14.4□□□□□ -0.1
HPS1Q92902 TUBB8P7-204ENST00000567960 1332 ntBASIC14.4□□□□□ -0.1
HPS1Q92902 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
HPS1Q92902 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 HNRNPRP1-201ENST00000453465 1695 ntBASIC14.39□□□□□ -0.11
HPS1Q92902 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
HPS1Q92902 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
HPS1Q92902 HTR5BP-201ENST00000430851 1154 ntBASIC14.39□□□□□ -0.11
HPS1Q92902 ACTG1P14-201ENST00000446382 1122 ntBASIC14.39□□□□□ -0.11
HPS1Q92902 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.39□□□□□ -0.11
HPS1Q92902 PAWRP1-201ENST00000451083 565 ntBASIC14.39□□□□□ -0.11
HPS1Q92902 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.39□□□□□ -0.11
HPS1Q92902 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
HPS1Q92902 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.39□□□□□ -0.11
HPS1Q92902 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.39□□□□□ -0.11
HPS1Q92902 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.39□□□□□ -0.11
HPS1Q92902 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 AC007064.4-201ENST00000637740 555 ntBASIC14.39□□□□□ -0.11
HPS1Q92902 AC092865.6-201ENST00000642101 219 ntBASIC14.39□□□□□ -0.11
HPS1Q92902 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.39□□□□□ -0.11
HPS1Q92902 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 AC118758.2-201ENST00000614242 2813 ntBASIC14.39□□□□□ -0.11
HPS1Q92902 AC091951.1-201ENST00000512854 2465 ntBASIC14.39□□□□□ -0.11
HPS1Q92902 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.39□□□□□ -0.11
HPS1Q92902 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 AC027612.1-201ENST00000445234 2395 ntBASIC14.39□□□□□ -0.11
HPS1Q92902 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC14.39□□□□□ -0.11
HPS1Q92902 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
HPS1Q92902 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.39□□□□□ -0.11
HPS1Q92902 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.39□□□□□ -0.11
HPS1Q92902 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
HPS1Q92902 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
HPS1Q92902 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
HPS1Q92902 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
HPS1Q92902 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms