Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
RTN4IP1Q8WWV3 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AC139749.1-202ENST00000617529 3139 ntBASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AC148477.4-201ENST00000613430 1793 ntBASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 UPF3AP3-201ENST00000420996 769 ntBASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AC142381.1-201ENST00000426099 345 ntBASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AL592309.1-201ENST00000443127 649 ntBASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AP000842.3-202ENST00000569238 1080 ntBASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AC024267.1-201ENST00000582320 895 ntBASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 AC018892.3-201ENST00000623986 2499 ntBASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 FOXO1B-201ENST00000504678 1527 ntBASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
RTN4IP1Q8WWV3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
RTN4IP1Q8WWV3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms