Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 MIR4741-201ENST00000579822 90 ntBASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 AC128714.1-201ENST00000637035 887 ntBASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 KRT8P19-201ENST00000551916 1455 ntBASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 AC022188.1-201ENST00000620960 1664 ntBASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 KRT8P37-201ENST00000451609 1420 ntBASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.8■□□□□ 0.44
U2AF1L4Q8WU68 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 PAUPAR-201ENST00000630360 2965 ntBASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 AC006001.1-201ENST00000325130 474 ntBASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 RPS2P36-201ENST00000456516 831 ntBASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 RN7SL769P-201ENST00000469386 295 ntBASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 MBP-227ENST00000526111 581 ntTSL 4 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
U2AF1L4Q8WU68 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 TARDBPP1-201ENST00000442013 1203 ntBASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 AC022137.2-201ENST00000503482 481 ntBASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 AC025279.2-201ENST00000569730 653 ntBASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 AC104982.3-201ENST00000581995 514 ntBASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 SPCS2P2-201ENST00000603270 608 ntBASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.78■□□□□ 0.44
U2AF1L4Q8WU68 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms