Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 MCCD1P2-201ENST00000423228 335 ntBASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 AP002472.1-201ENST00000577490 586 ntBASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 MIR4313-201ENST00000580760 101 ntBASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 MTDHP5-201ENST00000598980 586 ntBASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 AC138969.2-201ENST00000532739 9932 ntBASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 AC148477.4-201ENST00000613430 1793 ntBASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
PIK3C3Q8NEB9 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AL138918.1-201ENST00000568306 659 ntBASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AL671883.3-201ENST00000603274 991 ntBASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
PIK3C3Q8NEB9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms