Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 TIMM17BP1-201ENST00000545713 516 ntBASIC13.66□□□□□ -0.22
CPEB3Q8NE35 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 AJ011932.1-201ENST00000621707 465 ntBASIC13.66□□□□□ -0.22
CPEB3Q8NE35 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CPEB3Q8NE35 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 AC022532.1-201ENST00000624563 1728 ntBASIC13.65□□□□□ -0.22
CPEB3Q8NE35 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 TOMM22P5-201ENST00000416399 439 ntBASIC13.65□□□□□ -0.22
CPEB3Q8NE35 RASL12-203ENST00000434605 982 ntTSL 2 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 AL589987.1-201ENST00000453380 819 ntBASIC13.65□□□□□ -0.22
CPEB3Q8NE35 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 AC092337.1-201ENST00000568699 1129 ntBASIC13.65□□□□□ -0.22
CPEB3Q8NE35 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 AL096865.1-201ENST00000606796 927 ntBASIC13.65□□□□□ -0.22
CPEB3Q8NE35 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CPEB3Q8NE35 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms