Protein–RNA interactions for Protein: Q8IWV7

UBR1, E3 ubiquitin-protein ligase UBR1, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1Q8IWV7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC21.46■■□□□ 1.03
UBR1Q8IWV7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
UBR1Q8IWV7 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
UBR1Q8IWV7 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.03
UBR1Q8IWV7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
UBR1Q8IWV7 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC21.45■■□□□ 1.03
UBR1Q8IWV7 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
UBR1Q8IWV7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
UBR1Q8IWV7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 AC090502.4-201ENST00000551714 1386 ntBASIC21.45■■□□□ 1.02
UBR1Q8IWV7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 AL627422.1-201ENST00000434104 580 ntBASIC21.45■■□□□ 1.02
UBR1Q8IWV7 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 AC008825.2-201ENST00000603374 718 ntBASIC21.45■■□□□ 1.02
UBR1Q8IWV7 AC005041.3-201ENST00000606287 649 ntBASIC21.45■■□□□ 1.02
UBR1Q8IWV7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
UBR1Q8IWV7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 DUTP3-201ENST00000450025 415 ntBASIC21.44■■□□□ 1.02
UBR1Q8IWV7 FTH1P22-201ENST00000456305 520 ntBASIC21.44■■□□□ 1.02
UBR1Q8IWV7 POLD4-208ENST00000532830 904 ntTSL 3 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 MIR5196-201ENST00000578146 115 ntBASIC21.44■■□□□ 1.02
UBR1Q8IWV7 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
UBR1Q8IWV7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 AL157792.1-201ENST00000488281 530 ntBASIC21.43■■□□□ 1.02
UBR1Q8IWV7 AC008687.1-201ENST00000591656 786 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 AL360270.3-201ENST00000609118 1348 ntBASIC21.43■■□□□ 1.02
UBR1Q8IWV7 AC003102.2-201ENST00000589195 1469 ntBASIC21.43■■□□□ 1.02
UBR1Q8IWV7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 AC107464.3-201ENST00000609172 737 ntBASIC21.43■■□□□ 1.02
UBR1Q8IWV7 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.43■■□□□ 1.02
UBR1Q8IWV7 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBR1Q8IWV7 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBR1Q8IWV7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC21.42■■□□□ 1.02
UBR1Q8IWV7 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBR1Q8IWV7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBR1Q8IWV7 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC21.42■■□□□ 1.02
UBR1Q8IWV7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC21.42■■□□□ 1.02
UBR1Q8IWV7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
UBR1Q8IWV7 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms