Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 AC239800.4-201ENST00000603712 296 ntBASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 IGHV3-72-202ENST00000621503 303 ntBASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 AC020658.6-201ENST00000623564 1870 ntBASIC15.25■□□□□ 0.03
LRRTM4Q86VH4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 AC007389.4-201ENST00000454674 793 ntBASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 GIMAP3P-201ENST00000495150 836 ntBASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 GAPDHP40-201ENST00000505218 1006 ntBASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 AC132938.2-201ENST00000579188 680 ntBASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 PAUPAR-201ENST00000630360 2965 ntBASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 AL591163.1-201ENST00000641757 987 ntBASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
LRRTM4Q86VH4 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 AC087481.3-201ENST00000602886 1894 ntBASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 TTTY23B-201ENST00000442790 549 ntBASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
LRRTM4Q86VH4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms