Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.67■□□□□ 0.1
LYSMD3Q7Z3D4 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 CLK3P2-201ENST00000427566 1453 ntBASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 AL133267.1-201ENST00000398220 340 ntBASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 PIN1P1-201ENST00000412108 996 ntBASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 AC093004.1-201ENST00000508850 424 ntBASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LYSMD3Q7Z3D4 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 AC007541.1-201ENST00000570282 1469 ntBASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 SLC7A15P-201ENST00000424028 1363 ntBASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 RARRES2P5-201ENST00000564013 466 ntBASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LYSMD3Q7Z3D4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms