Protein–RNA interactions for Protein: Q6UWN0

LYPD4, Ly6/PLAUR domain-containing protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD4Q6UWN0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
LYPD4Q6UWN0 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYPD4Q6UWN0 AL607033.1-201ENST00000623900 1599 ntBASIC14.05□□□□□ -0.16
LYPD4Q6UWN0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
LYPD4Q6UWN0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.05□□□□□ -0.16
LYPD4Q6UWN0 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AC232323.1-201ENST00000540724 2099 ntBASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 REXO1L5P-201ENST00000622260 2098 ntBASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AC004832.2-201ENST00000426397 482 ntBASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 BANF1P1-201ENST00000553684 263 ntBASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 KRT8P23-201ENST00000560090 1207 ntBASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 BNIP3P41-202ENST00000616656 861 ntBASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 AC148477.4-201ENST00000613430 1793 ntBASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 OR2I1P-209ENST00000641730 5365 ntBASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
LYPD4Q6UWN0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 FAM58DP-201ENST00000428076 619 ntBASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
LYPD4Q6UWN0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms