Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USH1GQ495M9 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.82■□□□□ 0.44
USH1GQ495M9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.82■□□□□ 0.44
USH1GQ495M9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.82■□□□□ 0.44
USH1GQ495M9 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 AC012441.1-201ENST00000446669 685 ntBASIC17.82■□□□□ 0.44
USH1GQ495M9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.82■□□□□ 0.44
USH1GQ495M9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC17.82■□□□□ 0.44
USH1GQ495M9 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.82■□□□□ 0.44
USH1GQ495M9 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.82■□□□□ 0.44
USH1GQ495M9 MIR6752-201ENST00000618442 71 ntBASIC17.82■□□□□ 0.44
USH1GQ495M9 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.82■□□□□ 0.44
USH1GQ495M9 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.82■□□□□ 0.44
USH1GQ495M9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.82■□□□□ 0.44
USH1GQ495M9 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.82■□□□□ 0.44
USH1GQ495M9 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USH1GQ495M9 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
USH1GQ495M9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USH1GQ495M9 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.81■□□□□ 0.44
USH1GQ495M9 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
USH1GQ495M9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
USH1GQ495M9 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.81■□□□□ 0.44
USH1GQ495M9 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.81■□□□□ 0.44
USH1GQ495M9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
USH1GQ495M9 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 LBX2-201ENST00000341396 886 ntTSL 3 BASIC17.81■□□□□ 0.44
USH1GQ495M9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.81■□□□□ 0.44
USH1GQ495M9 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.81■□□□□ 0.44
USH1GQ495M9 AC005229.1-201ENST00000392885 409 ntBASIC17.81■□□□□ 0.44
USH1GQ495M9 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
USH1GQ495M9 CTBP2P5-201ENST00000454986 1264 ntBASIC17.81■□□□□ 0.44
USH1GQ495M9 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
USH1GQ495M9 AC104989.1-201ENST00000519711 778 ntBASIC17.81■□□□□ 0.44
USH1GQ495M9 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.81■□□□□ 0.44
USH1GQ495M9 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.81■□□□□ 0.44
USH1GQ495M9 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC17.81■□□□□ 0.44
USH1GQ495M9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.81■□□□□ 0.44
USH1GQ495M9 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.81■□□□□ 0.44
USH1GQ495M9 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.81■□□□□ 0.44
USH1GQ495M9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.81■□□□□ 0.44
USH1GQ495M9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
USH1GQ495M9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
USH1GQ495M9 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.8■□□□□ 0.44
USH1GQ495M9 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC17.8■□□□□ 0.44
USH1GQ495M9 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.8■□□□□ 0.44
USH1GQ495M9 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
USH1GQ495M9 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.8■□□□□ 0.44
USH1GQ495M9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.8■□□□□ 0.44
USH1GQ495M9 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.8■□□□□ 0.44
USH1GQ495M9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.8■□□□□ 0.44
USH1GQ495M9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.8■□□□□ 0.44
USH1GQ495M9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.8■□□□□ 0.44
USH1GQ495M9 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.8■□□□□ 0.44
USH1GQ495M9 APRT-204ENST00000563655 709 ntTSL 5 BASIC17.8■□□□□ 0.44
USH1GQ495M9 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
USH1GQ495M9 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.8■□□□□ 0.44
USH1GQ495M9 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USH1GQ495M9 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms