Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 HLA-DQB2-231ENST00000435145 2026 ntBASIC18.45■□□□□ 0.54
PDS5AQ29RF7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 MPV17-205ENST00000402310 906 ntTSL 5 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 MIR1202-201ENST00000408529 83 ntBASIC18.45■□□□□ 0.54
PDS5AQ29RF7 CNN2P10-201ENST00000443067 918 ntBASIC18.45■□□□□ 0.54
PDS5AQ29RF7 RPL13AP20-201ENST00000459725 609 ntBASIC18.45■□□□□ 0.54
PDS5AQ29RF7 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 MIR4525-201ENST00000580000 75 ntBASIC18.45■□□□□ 0.54
PDS5AQ29RF7 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDS5AQ29RF7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 REXO1L4P-201ENST00000605109 1937 ntBASIC18.44■□□□□ 0.54
PDS5AQ29RF7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDS5AQ29RF7 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.43■□□□□ 0.54
PDS5AQ29RF7 EEF1DP1-201ENST00000585891 896 ntBASIC18.43■□□□□ 0.54
PDS5AQ29RF7 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDS5AQ29RF7 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 AC012508.2-201ENST00000567613 1472 ntBASIC18.42■□□□□ 0.54
PDS5AQ29RF7 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDS5AQ29RF7 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms