Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SREBF2Q12772 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SREBF2Q12772 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SREBF2Q12772 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
SREBF2Q12772 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.54■□□□□ 0.4
SREBF2Q12772 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SREBF2Q12772 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SREBF2Q12772 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.54■□□□□ 0.4
SREBF2Q12772 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SREBF2Q12772 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SREBF2Q12772 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 AC106886.4-201ENST00000623557 2502 ntBASIC17.53■□□□□ 0.4
SREBF2Q12772 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 AC239868.1-201ENST00000369385 493 ntBASIC17.53■□□□□ 0.4
SREBF2Q12772 AP000356.3-201ENST00000382243 753 ntBASIC17.53■□□□□ 0.4
SREBF2Q12772 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
SREBF2Q12772 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.53■□□□□ 0.4
SREBF2Q12772 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC17.53■□□□□ 0.4
SREBF2Q12772 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.53■□□□□ 0.4
SREBF2Q12772 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC17.53■□□□□ 0.4
SREBF2Q12772 STUB1-204ENST00000564370 875 ntTSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.53■□□□□ 0.4
SREBF2Q12772 MIR4649-201ENST00000582839 64 ntBASIC17.53■□□□□ 0.4
SREBF2Q12772 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 AC018470.1-201ENST00000624790 3129 ntBASIC17.53■□□□□ 0.4
SREBF2Q12772 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SREBF2Q12772 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SREBF2Q12772 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
SREBF2Q12772 FAM90A2P-201ENST00000511144 1395 ntBASIC17.53■□□□□ 0.4
SREBF2Q12772 FAM90A25P-201ENST00000528404 1395 ntBASIC17.53■□□□□ 0.4
SREBF2Q12772 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.52■□□□□ 0.4
SREBF2Q12772 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC17.52■□□□□ 0.4
SREBF2Q12772 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.52■□□□□ 0.4
SREBF2Q12772 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.52■□□□□ 0.4
SREBF2Q12772 HLA-J-204ENST00000495278 958 ntBASIC17.52■□□□□ 0.4
SREBF2Q12772 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.52■□□□□ 0.4
SREBF2Q12772 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.52■□□□□ 0.4
SREBF2Q12772 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
SREBF2Q12772 PAM16-211ENST00000575848 518 ntTSL 3 BASIC17.52■□□□□ 0.4
SREBF2Q12772 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SREBF2Q12772 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC17.52■□□□□ 0.4
SREBF2Q12772 MIR6842-201ENST00000612539 65 ntBASIC17.52■□□□□ 0.4
SREBF2Q12772 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SREBF2Q12772 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SREBF2Q12772 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SREBF2Q12772 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SREBF2Q12772 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SREBF2Q12772 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC17.52■□□□□ 0.39
SREBF2Q12772 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SREBF2Q12772 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
SREBF2Q12772 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.52■□□□□ 0.39
SREBF2Q12772 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SREBF2Q12772 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.52■□□□□ 0.39
SREBF2Q12772 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
SREBF2Q12772 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SREBF2Q12772 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SREBF2Q12772 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SREBF2Q12772 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC17.51■□□□□ 0.39
SREBF2Q12772 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SREBF2Q12772 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.51■□□□□ 0.39
SREBF2Q12772 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SREBF2Q12772 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SREBF2Q12772 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SREBF2Q12772 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SREBF2Q12772 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SREBF2Q12772 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SREBF2Q12772 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.51■□□□□ 0.39
SREBF2Q12772 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SREBF2Q12772 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.51■□□□□ 0.39
SREBF2Q12772 RN7SKP175-201ENST00000408472 289 ntBASIC17.51■□□□□ 0.39
SREBF2Q12772 AC012441.2-201ENST00000444843 739 ntBASIC17.51■□□□□ 0.39
SREBF2Q12772 RN7SL67P-201ENST00000492147 296 ntBASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms