Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.26□□□□□ -0.13
LTBQ06643 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LTBQ06643 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBQ06643 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.26□□□□□ -0.13
LTBQ06643 SPDYE7P-202ENST00000420373 878 ntBASIC14.26□□□□□ -0.13
LTBQ06643 GPR53P-205ENST00000457298 1084 ntBASIC14.26□□□□□ -0.13
LTBQ06643 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.26□□□□□ -0.13
LTBQ06643 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.26□□□□□ -0.13
LTBQ06643 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBQ06643 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 LINC02228-204ENST00000642115 2962 ntBASIC14.26□□□□□ -0.13
LTBQ06643 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.26□□□□□ -0.13
LTBQ06643 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
LTBQ06643 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.26□□□□□ -0.13
LTBQ06643 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LTBQ06643 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LTBQ06643 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 PIN1P1-201ENST00000412108 996 ntBASIC14.25□□□□□ -0.13
LTBQ06643 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.25□□□□□ -0.13
LTBQ06643 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.25□□□□□ -0.13
LTBQ06643 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.25□□□□□ -0.13
LTBQ06643 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.25□□□□□ -0.13
LTBQ06643 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.25□□□□□ -0.13
LTBQ06643 SPDYE22P-201ENST00000582158 798 ntBASIC14.25□□□□□ -0.13
LTBQ06643 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LTBQ06643 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 SRP9-204ENST00000619790 377 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 C18orf15-201ENST00000623680 2534 ntBASIC14.25□□□□□ -0.13
LTBQ06643 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 AC023157.3-201ENST00000619086 2088 ntBASIC14.25□□□□□ -0.13
LTBQ06643 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LTBQ06643 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
LTBQ06643 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.25□□□□□ -0.13
LTBQ06643 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.24□□□□□ -0.13
LTBQ06643 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.24□□□□□ -0.13
LTBQ06643 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LTBQ06643 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LTBQ06643 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms