Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC15.25■□□□□ 0.03
CDK3Q00526 AC244107.1-201ENST00000442033 332 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 AL355864.2-201ENST00000447420 863 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 BCRP2-202ENST00000447763 634 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.25■□□□□ 0.03
CDK3Q00526 CROCCP4-201ENST00000457096 498 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 BCRP6-201ENST00000510112 632 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 BCRP7-201ENST00000511549 544 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.25■□□□□ 0.03
CDK3Q00526 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.25■□□□□ 0.03
CDK3Q00526 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CDK3Q00526 AC017083.2-201ENST00000608069 979 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 AP005019.2-201ENST00000615104 511 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 AL645728.2-202ENST00000641679 227 ntBASIC15.25■□□□□ 0.03
CDK3Q00526 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
CDK3Q00526 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDK3Q00526 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK3Q00526 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.25■□□□□ 0.03
CDK3Q00526 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK3Q00526 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.25■□□□□ 0.03
CDK3Q00526 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDK3Q00526 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.25■□□□□ 0.03
CDK3Q00526 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDK3Q00526 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.24■□□□□ 0.03
CDK3Q00526 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDK3Q00526 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 BOLA2P3-201ENST00000404566 256 ntBASIC15.24■□□□□ 0.03
CDK3Q00526 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 AC004066.1-201ENST00000502488 802 ntBASIC15.24■□□□□ 0.03
CDK3Q00526 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.24■□□□□ 0.03
CDK3Q00526 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC15.24■□□□□ 0.03
CDK3Q00526 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.24■□□□□ 0.03
CDK3Q00526 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 AC008741.2-201ENST00000612792 3115 ntBASIC15.24■□□□□ 0.03
CDK3Q00526 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 AC020658.6-201ENST00000623564 1870 ntBASIC15.24■□□□□ 0.03
CDK3Q00526 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.24■□□□□ 0.03
CDK3Q00526 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
CDK3Q00526 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.24■□□□□ 0.03
CDK3Q00526 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
CDK3Q00526 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
CDK3Q00526 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDK3Q00526 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.24■□□□□ 0.03
CDK3Q00526 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDK3Q00526 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDK3Q00526 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.23■□□□□ 0.03
CDK3Q00526 AC093525.8-201ENST00000624099 1342 ntBASIC15.23■□□□□ 0.03
CDK3Q00526 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.23■□□□□ 0.03
CDK3Q00526 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDK3Q00526 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDK3Q00526 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDK3Q00526 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDK3Q00526 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.23■□□□□ 0.03
CDK3Q00526 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
CDK3Q00526 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.23■□□□□ 0.03
CDK3Q00526 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDK3Q00526 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDK3Q00526 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDK3Q00526 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
CDK3Q00526 PGGT1BP2-201ENST00000398621 1028 ntBASIC15.23■□□□□ 0.03
CDK3Q00526 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.23■□□□□ 0.03
CDK3Q00526 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CDK3Q00526 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.23■□□□□ 0.03
CDK3Q00526 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.23■□□□□ 0.03
CDK3Q00526 INO80C-210ENST00000590757 595 ntTSL 2 BASIC15.23■□□□□ 0.03
CDK3Q00526 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms