Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC13.81□□□□□ -0.2
NKX6-1P78426 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 AC006449.5-201ENST00000610658 2098 ntBASIC13.81□□□□□ -0.2
NKX6-1P78426 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.81□□□□□ -0.2
NKX6-1P78426 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 MIR648-201ENST00000385046 94 ntBASIC13.81□□□□□ -0.2
NKX6-1P78426 FO393414.2-201ENST00000405153 598 ntBASIC13.81□□□□□ -0.2
NKX6-1P78426 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 HIST3H2BA-201ENST00000436555 524 ntBASIC13.81□□□□□ -0.2
NKX6-1P78426 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 TPRX2P-201ENST00000535362 881 ntBASIC13.81□□□□□ -0.2
NKX6-1P78426 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.81□□□□□ -0.2
NKX6-1P78426 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.81□□□□□ -0.2
NKX6-1P78426 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 AC099568.2-201ENST00000609194 695 ntBASIC13.81□□□□□ -0.2
NKX6-1P78426 AC133552.6-201ENST00000613406 534 ntBASIC13.81□□□□□ -0.2
NKX6-1P78426 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.81□□□□□ -0.2
NKX6-1P78426 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NKX6-1P78426 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
NKX6-1P78426 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-1P78426 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-1P78426 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-1P78426 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NKX6-1P78426 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NKX6-1P78426 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.8□□□□□ -0.2
NKX6-1P78426 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX6-1P78426 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
NKX6-1P78426 AC114501.2-201ENST00000439631 535 ntBASIC13.8□□□□□ -0.2
NKX6-1P78426 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX6-1P78426 KRT223P-202ENST00000449164 1292 ntBASIC13.8□□□□□ -0.2
NKX6-1P78426 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX6-1P78426 FAM8A2P-201ENST00000528813 1142 ntBASIC13.8□□□□□ -0.2
NKX6-1P78426 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX6-1P78426 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
NKX6-1P78426 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NKX6-1P78426 AC084346.2-201ENST00000607097 949 ntBASIC13.8□□□□□ -0.2
NKX6-1P78426 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.8□□□□□ -0.2
NKX6-1P78426 MIR6069-201ENST00000620069 79 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms