Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.17■□□□□ 0.5
IRX3P78415 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
IRX3P78415 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.17■□□□□ 0.5
IRX3P78415 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC18.16■□□□□ 0.5
IRX3P78415 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
IRX3P78415 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 AC022137.2-201ENST00000503482 481 ntBASIC18.16■□□□□ 0.5
IRX3P78415 AC026410.3-201ENST00000514280 936 ntBASIC18.16■□□□□ 0.5
IRX3P78415 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC18.16■□□□□ 0.5
IRX3P78415 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
IRX3P78415 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 RIT1-205ENST00000539040 919 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC18.16■□□□□ 0.5
IRX3P78415 AC103810.3-201ENST00000583567 96 ntBASIC18.16■□□□□ 0.5
IRX3P78415 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC18.16■□□□□ 0.5
IRX3P78415 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
IRX3P78415 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
IRX3P78415 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
IRX3P78415 NFIC-211ENST00000641145 8399 ntBASIC18.16■□□□□ 0.5
IRX3P78415 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
IRX3P78415 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
IRX3P78415 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
IRX3P78415 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC18.15■□□□□ 0.5
IRX3P78415 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.15■□□□□ 0.5
IRX3P78415 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC18.15■□□□□ 0.5
IRX3P78415 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
IRX3P78415 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC18.15■□□□□ 0.5
IRX3P78415 RN7SL560P-201ENST00000577943 264 ntBASIC18.15■□□□□ 0.5
IRX3P78415 IFT20-206ENST00000578122 834 ntTSL 2 BASIC18.15■□□□□ 0.5
IRX3P78415 IFT20-208ENST00000578985 831 ntTSL 3 BASIC18.15■□□□□ 0.5
IRX3P78415 AC243960.2-201ENST00000600996 747 ntBASIC18.15■□□□□ 0.5
IRX3P78415 AC093813.1-201ENST00000605066 256 ntBASIC18.15■□□□□ 0.5
IRX3P78415 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 LARP4-220ENST00000615080 856 ntTSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.15■□□□□ 0.5
IRX3P78415 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
IRX3P78415 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.15■□□□□ 0.5
IRX3P78415 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
IRX3P78415 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.5
IRX3P78415 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
IRX3P78415 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
IRX3P78415 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.14■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms