Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.77■□□□□ 0.12
PRAMEP78395 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
PRAMEP78395 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 RPL37AP1-201ENST00000412502 279 ntBASIC15.77■□□□□ 0.12
PRAMEP78395 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 FAM86GP-201ENST00000448322 971 ntBASIC15.77■□□□□ 0.12
PRAMEP78395 KLF2P3-201ENST00000451977 1087 ntBASIC15.77■□□□□ 0.12
PRAMEP78395 AC067863.1-201ENST00000494933 530 ntBASIC15.77■□□□□ 0.12
PRAMEP78395 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
PRAMEP78395 AC069120.2-201ENST00000524091 540 ntBASIC15.77■□□□□ 0.12
PRAMEP78395 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC15.77■□□□□ 0.12
PRAMEP78395 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.77■□□□□ 0.12
PRAMEP78395 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.77■□□□□ 0.12
PRAMEP78395 SPDYE12P-201ENST00000618416 771 ntBASIC15.77■□□□□ 0.12
PRAMEP78395 AL033527.5-202ENST00000641632 1098 ntBASIC15.77■□□□□ 0.12
PRAMEP78395 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.77■□□□□ 0.12
PRAMEP78395 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PRAMEP78395 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.11
PRAMEP78395 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PRAMEP78395 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.77■□□□□ 0.11
PRAMEP78395 AL109954.1-202ENST00000564051 2148 ntBASIC15.77■□□□□ 0.11
PRAMEP78395 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
PRAMEP78395 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.77■□□□□ 0.11
PRAMEP78395 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.77■□□□□ 0.11
PRAMEP78395 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC15.77■□□□□ 0.11
PRAMEP78395 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.77■□□□□ 0.11
PRAMEP78395 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
PRAMEP78395 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
PRAMEP78395 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEP78395 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEP78395 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 AC023157.3-201ENST00000619086 2088 ntBASIC15.76■□□□□ 0.11
PRAMEP78395 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEP78395 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.76■□□□□ 0.11
PRAMEP78395 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
PRAMEP78395 AC107890.1-201ENST00000422478 521 ntBASIC15.76■□□□□ 0.11
PRAMEP78395 TARDBPP1-201ENST00000442013 1203 ntBASIC15.76■□□□□ 0.11
PRAMEP78395 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.76■□□□□ 0.11
PRAMEP78395 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEP78395 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.76■□□□□ 0.11
PRAMEP78395 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEP78395 AC073592.8-201ENST00000624126 511 ntBASIC15.76■□□□□ 0.11
PRAMEP78395 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 C18orf15-201ENST00000623680 2534 ntBASIC15.76■□□□□ 0.11
PRAMEP78395 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEP78395 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
PRAMEP78395 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
PRAMEP78395 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC15.76■□□□□ 0.11
PRAMEP78395 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
PRAMEP78395 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.76■□□□□ 0.11
PRAMEP78395 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 289.7 ms