Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.03□□□□□ -0.16
VBP1P61758 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
VBP1P61758 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
VBP1P61758 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
VBP1P61758 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VBP1P61758 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
VBP1P61758 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VBP1P61758 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VBP1P61758 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VBP1P61758 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
VBP1P61758 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
VBP1P61758 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.02□□□□□ -0.16
VBP1P61758 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.02□□□□□ -0.16
VBP1P61758 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
VBP1P61758 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
VBP1P61758 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.02□□□□□ -0.17
VBP1P61758 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
VBP1P61758 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.02□□□□□ -0.17
VBP1P61758 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.02□□□□□ -0.17
VBP1P61758 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.02□□□□□ -0.17
VBP1P61758 AP002469.2-201ENST00000531724 424 ntBASIC14.02□□□□□ -0.17
VBP1P61758 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.02□□□□□ -0.17
VBP1P61758 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC14.02□□□□□ -0.17
VBP1P61758 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.02□□□□□ -0.17
VBP1P61758 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.02□□□□□ -0.17
VBP1P61758 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
VBP1P61758 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
VBP1P61758 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.02□□□□□ -0.17
VBP1P61758 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14.02□□□□□ -0.17
VBP1P61758 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
VBP1P61758 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
VBP1P61758 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VBP1P61758 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
VBP1P61758 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 AP005117.1-201ENST00000584346 1413 ntBASIC14.01□□□□□ -0.17
VBP1P61758 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.01□□□□□ -0.17
VBP1P61758 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 AL137013.1-201ENST00000432946 1228 ntBASIC14.01□□□□□ -0.17
VBP1P61758 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.01□□□□□ -0.17
VBP1P61758 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.01□□□□□ -0.17
VBP1P61758 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
VBP1P61758 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
VBP1P61758 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
VBP1P61758 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
VBP1P61758 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
VBP1P61758 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
VBP1P61758 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
VBP1P61758 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
VBP1P61758 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms