Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
RIPPLY3P57055 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.99□□□□□ -0.33
RIPPLY3P57055 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 AL096828.2-201ENST00000567259 1965 ntBASIC12.99□□□□□ -0.33
RIPPLY3P57055 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC12.99□□□□□ -0.33
RIPPLY3P57055 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.99□□□□□ -0.33
RIPPLY3P57055 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC12.99□□□□□ -0.33
RIPPLY3P57055 AC046185.3-201ENST00000623228 1824 ntBASIC12.99□□□□□ -0.33
RIPPLY3P57055 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.99□□□□□ -0.33
RIPPLY3P57055 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RIPPLY3P57055 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.98□□□□□ -0.33
RIPPLY3P57055 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 IGHV3-37-201ENST00000518544 340 ntBASIC12.98□□□□□ -0.33
RIPPLY3P57055 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AL118516.1-201ENST00000564152 670 ntBASIC12.98□□□□□ -0.33
RIPPLY3P57055 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 CYGB-203ENST00000589145 788 ntTSL 3 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AC138951.2-201ENST00000623455 1161 ntBASIC12.98□□□□□ -0.33
RIPPLY3P57055 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AC093010.1-201ENST00000473625 1624 ntBASIC12.98□□□□□ -0.33
RIPPLY3P57055 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RIPPLY3P57055 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RIPPLY3P57055 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RIPPLY3P57055 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RIPPLY3P57055 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms