Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.73■□□□□ 0.11
WNT3AP56704 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.73■□□□□ 0.11
WNT3AP56704 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.73■□□□□ 0.11
WNT3AP56704 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.73■□□□□ 0.11
WNT3AP56704 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.73■□□□□ 0.11
WNT3AP56704 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
WNT3AP56704 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.73■□□□□ 0.11
WNT3AP56704 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
WNT3AP56704 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
WNT3AP56704 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
WNT3AP56704 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.72■□□□□ 0.11
WNT3AP56704 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 UGT1A2P-201ENST00000454886 866 ntBASIC15.72■□□□□ 0.11
WNT3AP56704 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.72■□□□□ 0.11
WNT3AP56704 AL391069.4-201ENST00000609583 481 ntBASIC15.72■□□□□ 0.11
WNT3AP56704 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.72■□□□□ 0.11
WNT3AP56704 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.72■□□□□ 0.11
WNT3AP56704 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.72■□□□□ 0.11
WNT3AP56704 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
WNT3AP56704 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
WNT3AP56704 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
WNT3AP56704 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.71■□□□□ 0.11
WNT3AP56704 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.71■□□□□ 0.11
WNT3AP56704 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.71■□□□□ 0.11
WNT3AP56704 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC15.71■□□□□ 0.11
WNT3AP56704 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
WNT3AP56704 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 DOC2GP-202ENST00000514950 1163 ntBASIC15.71■□□□□ 0.11
WNT3AP56704 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.71■□□□□ 0.11
WNT3AP56704 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.71■□□□□ 0.11
WNT3AP56704 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
WNT3AP56704 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.71■□□□□ 0.11
WNT3AP56704 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
WNT3AP56704 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
WNT3AP56704 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
WNT3AP56704 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
WNT3AP56704 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
WNT3AP56704 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
WNT3AP56704 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
WNT3AP56704 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
WNT3AP56704 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.7■□□□□ 0.1
WNT3AP56704 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.7■□□□□ 0.1
WNT3AP56704 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
WNT3AP56704 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
WNT3AP56704 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
WNT3AP56704 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
WNT3AP56704 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms