Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPT1AP50416 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPT1AP50416 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPT1AP50416 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.08■□□□□ 0.33
CPT1AP50416 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
CPT1AP50416 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CPT1AP50416 AC127383.1-201ENST00000444697 1800 ntBASIC17.08■□□□□ 0.33
CPT1AP50416 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPT1AP50416 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.08■□□□□ 0.32
CPT1AP50416 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 EIF3FP3-201ENST00000434851 1086 ntBASIC17.08■□□□□ 0.32
CPT1AP50416 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.08■□□□□ 0.32
CPT1AP50416 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.08■□□□□ 0.32
CPT1AP50416 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 RHOQP1-201ENST00000555758 579 ntBASIC17.08■□□□□ 0.32
CPT1AP50416 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 PPY2P-201ENST00000582808 702 ntBASIC17.08■□□□□ 0.32
CPT1AP50416 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.08■□□□□ 0.32
CPT1AP50416 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.08■□□□□ 0.32
CPT1AP50416 AC106872.11-201ENST00000605838 421 ntBASIC17.08■□□□□ 0.32
CPT1AP50416 ZACNP1-201ENST00000612259 710 ntBASIC17.08■□□□□ 0.32
CPT1AP50416 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CPT1AP50416 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.08■□□□□ 0.32
CPT1AP50416 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
CPT1AP50416 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CPT1AP50416 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC17.08■□□□□ 0.32
CPT1AP50416 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.08■□□□□ 0.32
CPT1AP50416 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CPT1AP50416 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.08■□□□□ 0.32
CPT1AP50416 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.08■□□□□ 0.32
CPT1AP50416 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPT1AP50416 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC17.08■□□□□ 0.32
CPT1AP50416 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.08■□□□□ 0.32
CPT1AP50416 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC17.07■□□□□ 0.32
CPT1AP50416 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CPT1AP50416 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CPT1AP50416 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 AC018735.1-201ENST00000437208 1502 ntBASIC17.07■□□□□ 0.32
CPT1AP50416 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.07■□□□□ 0.32
CPT1AP50416 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 AC004945.1-201ENST00000416738 983 ntBASIC17.07■□□□□ 0.32
CPT1AP50416 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC17.07■□□□□ 0.32
CPT1AP50416 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.07■□□□□ 0.32
CPT1AP50416 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 OR10B1P-201ENST00000601666 907 ntBASIC17.07■□□□□ 0.32
CPT1AP50416 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC17.07■□□□□ 0.32
CPT1AP50416 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.07■□□□□ 0.32
CPT1AP50416 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC17.07■□□□□ 0.32
CPT1AP50416 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.07■□□□□ 0.32
CPT1AP50416 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPT1AP50416 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CPT1AP50416 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPT1AP50416 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPT1AP50416 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.06■□□□□ 0.32
CPT1AP50416 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPT1AP50416 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.06■□□□□ 0.32
CPT1AP50416 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPT1AP50416 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPT1AP50416 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPT1AP50416 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPT1AP50416 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CPT1AP50416 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms