Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CENPFP49454 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CENPFP49454 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CENPFP49454 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CENPFP49454 PCDHA14-201ENST00000506751 2298 ntBASIC17.16■□□□□ 0.34
CENPFP49454 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CENPFP49454 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.16■□□□□ 0.34
CENPFP49454 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CENPFP49454 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CENPFP49454 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CENPFP49454 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CENPFP49454 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CENPFP49454 AC009955.4-201ENST00000597192 544 ntBASIC17.16■□□□□ 0.34
CENPFP49454 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CENPFP49454 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
CENPFP49454 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CENPFP49454 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CENPFP49454 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CENPFP49454 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.16■□□□□ 0.34
CENPFP49454 PCNA-202ENST00000379160 1359 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CENPFP49454 MBLAC2-202ENST00000514906 1936 ntBASIC17.16■□□□□ 0.34
CENPFP49454 AC026471.1-201ENST00000564629 3026 ntBASIC17.16■□□□□ 0.34
CENPFP49454 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.16■□□□□ 0.34
CENPFP49454 E2F3P2-201ENST00000447755 1422 ntBASIC17.16■□□□□ 0.34
CENPFP49454 AC020763.4-201ENST00000623414 4170 ntBASIC17.16■□□□□ 0.34
CENPFP49454 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC17.15■□□□□ 0.34
CENPFP49454 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.15■□□□□ 0.34
CENPFP49454 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC17.15■□□□□ 0.34
CENPFP49454 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CENPFP49454 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.15■□□□□ 0.34
CENPFP49454 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CENPFP49454 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CENPFP49454 AC132872.4-202ENST00000622924 2756 ntBASIC17.15■□□□□ 0.34
CENPFP49454 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.15■□□□□ 0.34
CENPFP49454 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC17.15■□□□□ 0.34
CENPFP49454 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.15■□□□□ 0.34
CENPFP49454 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.15■□□□□ 0.34
CENPFP49454 RPL7P35-201ENST00000446943 740 ntBASIC17.15■□□□□ 0.34
CENPFP49454 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.15■□□□□ 0.34
CENPFP49454 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC17.15■□□□□ 0.34
CENPFP49454 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC17.15■□□□□ 0.34
CENPFP49454 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.15■□□□□ 0.34
CENPFP49454 CLUHP2-201ENST00000426660 1303 ntBASIC17.15■□□□□ 0.34
CENPFP49454 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 CICP13-201ENST00000422015 2789 ntBASIC17.15■□□□□ 0.34
CENPFP49454 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.15■□□□□ 0.34
CENPFP49454 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC17.15■□□□□ 0.34
CENPFP49454 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.15■□□□□ 0.34
CENPFP49454 NAP1L6-202ENST00000641404 1222 ntBASIC17.15■□□□□ 0.34
CENPFP49454 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CENPFP49454 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CENPFP49454 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CENPFP49454 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CENPFP49454 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
CENPFP49454 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
CENPFP49454 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CENPFP49454 KRT8P29-201ENST00000420409 1371 ntBASIC17.14■□□□□ 0.33
CENPFP49454 AC011840.2-201ENST00000563063 1520 ntBASIC17.14■□□□□ 0.33
CENPFP49454 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 AC055811.4-201ENST00000624039 1754 ntBASIC17.14■□□□□ 0.33
CENPFP49454 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.14■□□□□ 0.33
CENPFP49454 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.14■□□□□ 0.33
CENPFP49454 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.14■□□□□ 0.33
CENPFP49454 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 RN7SL258P-201ENST00000478664 300 ntBASIC17.14■□□□□ 0.33
CENPFP49454 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CENPFP49454 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC17.14■□□□□ 0.33
CENPFP49454 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 C2orf69P1-201ENST00000563532 1093 ntBASIC17.14■□□□□ 0.33
CENPFP49454 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC17.14■□□□□ 0.33
CENPFP49454 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC17.14■□□□□ 0.33
CENPFP49454 AC020916.1-201ENST00000587762 1774 ntBASIC17.14■□□□□ 0.33
CENPFP49454 OR10B1P-201ENST00000601666 907 ntBASIC17.14■□□□□ 0.33
CENPFP49454 RNF146-211ENST00000609447 607 ntTSL 4 BASIC17.14■□□□□ 0.33
CENPFP49454 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.14■□□□□ 0.33
CENPFP49454 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.14■□□□□ 0.33
CENPFP49454 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CENPFP49454 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms