Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
EPHA3P29320 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
EPHA3P29320 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.21■□□□□ 0.02
EPHA3P29320 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC15.21■□□□□ 0.02
EPHA3P29320 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.2■□□□□ 0.02
EPHA3P29320 HLA-A-201ENST00000376802 1334 ntBASIC15.2■□□□□ 0.02
EPHA3P29320 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 LINC01230-201ENST00000625222 3017 ntBASIC15.2■□□□□ 0.02
EPHA3P29320 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.2■□□□□ 0.02
EPHA3P29320 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
EPHA3P29320 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 TFAMP1-201ENST00000412727 736 ntBASIC15.2■□□□□ 0.02
EPHA3P29320 AL355306.1-201ENST00000415580 579 ntBASIC15.2■□□□□ 0.02
EPHA3P29320 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.2■□□□□ 0.02
EPHA3P29320 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.2■□□□□ 0.02
EPHA3P29320 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.2■□□□□ 0.02
EPHA3P29320 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC15.2■□□□□ 0.02
EPHA3P29320 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.2■□□□□ 0.02
EPHA3P29320 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.2■□□□□ 0.02
EPHA3P29320 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.2■□□□□ 0.02
EPHA3P29320 AC092865.6-201ENST00000642101 219 ntBASIC15.2■□□□□ 0.02
EPHA3P29320 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
EPHA3P29320 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.2■□□□□ 0.02
EPHA3P29320 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.2■□□□□ 0.02
EPHA3P29320 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.2■□□□□ 0.02
EPHA3P29320 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.2■□□□□ 0.02
EPHA3P29320 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.2■□□□□ 0.02
EPHA3P29320 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
EPHA3P29320 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.2■□□□□ 0.02
EPHA3P29320 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
EPHA3P29320 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.19■□□□□ 0.02
EPHA3P29320 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.19■□□□□ 0.02
EPHA3P29320 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 AL671277.1-201ENST00000429656 993 ntBASIC15.19■□□□□ 0.02
EPHA3P29320 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.19■□□□□ 0.02
EPHA3P29320 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.19■□□□□ 0.02
EPHA3P29320 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
EPHA3P29320 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
EPHA3P29320 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
EPHA3P29320 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.19■□□□□ 0.02
EPHA3P29320 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
EPHA3P29320 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
EPHA3P29320 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms