Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
GDF1P27539 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.11□□□□□ -0.15
GDF1P27539 U91328.1-201ENST00000437528 223 ntBASIC14.11□□□□□ -0.15
GDF1P27539 AC244107.1-201ENST00000442033 332 ntBASIC14.11□□□□□ -0.15
GDF1P27539 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.11□□□□□ -0.15
GDF1P27539 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.11□□□□□ -0.15
GDF1P27539 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 TDH-203ENST00000531764 1110 ntBASIC14.11□□□□□ -0.15
GDF1P27539 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 AC008735.3-201ENST00000596646 500 ntBASIC14.11□□□□□ -0.15
GDF1P27539 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
GDF1P27539 AC107373.2-201ENST00000607735 490 ntBASIC14.11□□□□□ -0.15
GDF1P27539 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 AC008894.3-201ENST00000624324 3103 ntBASIC14.11□□□□□ -0.15
GDF1P27539 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 AP005117.1-202ENST00000581724 1908 ntBASIC14.11□□□□□ -0.15
GDF1P27539 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.11□□□□□ -0.15
GDF1P27539 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
GDF1P27539 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
GDF1P27539 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
GDF1P27539 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
GDF1P27539 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.1□□□□□ -0.15
GDF1P27539 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.1□□□□□ -0.15
GDF1P27539 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 HYMAI-201ENST00000635591 3347 ntBASIC14.1□□□□□ -0.15
GDF1P27539 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
GDF1P27539 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
GDF1P27539 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.1□□□□□ -0.15
GDF1P27539 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.09□□□□□ -0.15
GDF1P27539 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
GDF1P27539 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms