Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
NR4A1P22736 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 YBX2P1-201ENST00000394192 760 ntBASIC14.58□□□□□ -0.08
NR4A1P22736 KRT18P13-201ENST00000400056 1290 ntBASIC14.58□□□□□ -0.08
NR4A1P22736 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.58□□□□□ -0.08
NR4A1P22736 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.58□□□□□ -0.08
NR4A1P22736 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.58□□□□□ -0.08
NR4A1P22736 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC14.58□□□□□ -0.08
NR4A1P22736 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.58□□□□□ -0.08
NR4A1P22736 PDPK2P-202ENST00000562415 1191 ntBASIC14.58□□□□□ -0.08
NR4A1P22736 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.58□□□□□ -0.08
NR4A1P22736 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.58□□□□□ -0.08
NR4A1P22736 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.58□□□□□ -0.08
NR4A1P22736 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.58□□□□□ -0.08
NR4A1P22736 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.58□□□□□ -0.08
NR4A1P22736 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.58□□□□□ -0.08
NR4A1P22736 AL513190.1-201ENST00000621254 727 ntBASIC14.58□□□□□ -0.08
NR4A1P22736 AL645728.2-201ENST00000641974 660 ntBASIC14.58□□□□□ -0.08
NR4A1P22736 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NR4A1P22736 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.58□□□□□ -0.08
NR4A1P22736 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
NR4A1P22736 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.58□□□□□ -0.08
NR4A1P22736 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NR4A1P22736 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
NR4A1P22736 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NR4A1P22736 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.58□□□□□ -0.08
NR4A1P22736 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NR4A1P22736 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
NR4A1P22736 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NR4A1P22736 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC14.57□□□□□ -0.08
NR4A1P22736 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.57□□□□□ -0.08
NR4A1P22736 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.57□□□□□ -0.08
NR4A1P22736 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.57□□□□□ -0.08
NR4A1P22736 AC074386.1-202ENST00000463561 864 ntBASIC14.57□□□□□ -0.08
NR4A1P22736 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.57□□□□□ -0.08
NR4A1P22736 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.57□□□□□ -0.08
NR4A1P22736 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
NR4A1P22736 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.57□□□□□ -0.08
NR4A1P22736 AC091167.2-201ENST00000579581 588 ntBASIC14.57□□□□□ -0.08
NR4A1P22736 MPDU1-223ENST00000582151 728 ntBASIC14.57□□□□□ -0.08
NR4A1P22736 MIR4515-201ENST00000584082 81 ntBASIC14.57□□□□□ -0.08
NR4A1P22736 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.57□□□□□ -0.08
NR4A1P22736 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 AC005622.1-201ENST00000636801 1703 ntBASIC14.57□□□□□ -0.08
NR4A1P22736 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NR4A1P22736 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
NR4A1P22736 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NR4A1P22736 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NR4A1P22736 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.56□□□□□ -0.08
NR4A1P22736 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.56□□□□□ -0.08
NR4A1P22736 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
NR4A1P22736 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.56□□□□□ -0.08
NR4A1P22736 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
NR4A1P22736 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
NR4A1P22736 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NR4A1P22736 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
NR4A1P22736 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms