Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 INTS4P1-203ENST00000641008 3683 ntBASIC14.52□□□□□ -0.09
TNFRSF1BP20333 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
TNFRSF1BP20333 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 CICP14-201ENST00000629111 2732 ntBASIC14.51□□□□□ -0.09
TNFRSF1BP20333 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 BANF1P1-201ENST00000553684 263 ntBASIC14.51□□□□□ -0.09
TNFRSF1BP20333 KRT8P23-201ENST00000560090 1207 ntBASIC14.51□□□□□ -0.09
TNFRSF1BP20333 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 OR2I1P-210ENST00000642037 4691 ntBASIC14.51□□□□□ -0.09
TNFRSF1BP20333 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
TNFRSF1BP20333 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
TNFRSF1BP20333 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms