Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CCDC130P13994 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
CCDC130P13994 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 TSPY26P-202ENST00000565928 3884 ntBASIC16.47■□□□□ 0.23
CCDC130P13994 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CCDC130P13994 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CCDC130P13994 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC130P13994 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CCDC130P13994 AC098614.1-201ENST00000368528 745 ntBASIC16.47■□□□□ 0.23
CCDC130P13994 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC130P13994 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 INE1-201ENST00000456273 945 ntBASIC16.47■□□□□ 0.23
CCDC130P13994 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC130P13994 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.47■□□□□ 0.23
CCDC130P13994 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 AC120045.2-201ENST00000567334 178 ntBASIC16.47■□□□□ 0.23
CCDC130P13994 AC124283.3-201ENST00000570869 594 ntBASIC16.47■□□□□ 0.23
CCDC130P13994 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.47■□□□□ 0.23
CCDC130P13994 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.47■□□□□ 0.23
CCDC130P13994 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 AL358472.5-202ENST00000641448 1267 ntBASIC16.47■□□□□ 0.23
CCDC130P13994 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 AC087481.3-201ENST00000602886 1894 ntBASIC16.47■□□□□ 0.23
CCDC130P13994 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
CCDC130P13994 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.47■□□□□ 0.23
CCDC130P13994 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CCDC130P13994 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
CCDC130P13994 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 DRD5P1-201ENST00000456605 1438 ntBASIC16.46■□□□□ 0.23
CCDC130P13994 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 SSR4P1-203ENST00000599569 2260 ntBASIC16.46■□□□□ 0.23
CCDC130P13994 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC130P13994 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 NME2P1-201ENST00000426182 414 ntBASIC16.46■□□□□ 0.23
CCDC130P13994 AC134915.1-201ENST00000426461 574 ntBASIC16.46■□□□□ 0.23
CCDC130P13994 AC005034.1-201ENST00000426657 489 ntBASIC16.46■□□□□ 0.23
CCDC130P13994 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC130P13994 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC130P13994 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.46■□□□□ 0.23
CCDC130P13994 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 AC107373.2-201ENST00000607735 490 ntBASIC16.46■□□□□ 0.23
CCDC130P13994 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CCDC130P13994 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CCDC130P13994 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.46■□□□□ 0.23
CCDC130P13994 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CCDC130P13994 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.46■□□□□ 0.22
CCDC130P13994 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC130P13994 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC130P13994 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC130P13994 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms