Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
MMP2P08253 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.61■□□□□ 0.09
MMP2P08253 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC15.61■□□□□ 0.09
MMP2P08253 AGAP7P-201ENST00000582299 2062 ntBASIC15.61■□□□□ 0.09
MMP2P08253 AGAP14-201ENST00000624701 2060 ntBASIC15.61■□□□□ 0.09
MMP2P08253 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
MMP2P08253 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
MMP2P08253 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC15.61■□□□□ 0.09
MMP2P08253 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 REXO1L4P-201ENST00000605109 1937 ntBASIC15.6■□□□□ 0.09
MMP2P08253 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.6■□□□□ 0.09
MMP2P08253 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.6■□□□□ 0.09
MMP2P08253 AL359258.3-201ENST00000622910 2331 ntBASIC15.6■□□□□ 0.09
MMP2P08253 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
MMP2P08253 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MMP2P08253 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.6■□□□□ 0.09
MMP2P08253 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
MMP2P08253 AC087499.6-201ENST00000411576 835 ntBASIC15.6■□□□□ 0.09
MMP2P08253 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.6■□□□□ 0.09
MMP2P08253 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.6■□□□□ 0.09
MMP2P08253 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.6■□□□□ 0.09
MMP2P08253 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.6■□□□□ 0.09
MMP2P08253 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC15.6■□□□□ 0.09
MMP2P08253 TMEM261P1-201ENST00000604899 340 ntBASIC15.6■□□□□ 0.09
MMP2P08253 AC008494.3-201ENST00000606615 944 ntBASIC15.6■□□□□ 0.09
MMP2P08253 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.6■□□□□ 0.09
MMP2P08253 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.6■□□□□ 0.09
MMP2P08253 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
MMP2P08253 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.6■□□□□ 0.09
MMP2P08253 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.6■□□□□ 0.09
MMP2P08253 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.6■□□□□ 0.09
MMP2P08253 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
MMP2P08253 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.59■□□□□ 0.09
MMP2P08253 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.59■□□□□ 0.09
MMP2P08253 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.59■□□□□ 0.09
MMP2P08253 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.59■□□□□ 0.09
MMP2P08253 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.59■□□□□ 0.09
MMP2P08253 AL442647.2-201ENST00000429864 857 ntBASIC15.59■□□□□ 0.09
MMP2P08253 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.59■□□□□ 0.09
MMP2P08253 AC120045.2-201ENST00000567334 178 ntBASIC15.59■□□□□ 0.09
MMP2P08253 AC124283.3-201ENST00000570869 594 ntBASIC15.59■□□□□ 0.09
MMP2P08253 SPDYE22P-201ENST00000582158 798 ntBASIC15.59■□□□□ 0.09
MMP2P08253 AC138761.1-201ENST00000584393 385 ntBASIC15.59■□□□□ 0.09
MMP2P08253 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MMP2P08253 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.59■□□□□ 0.09
MMP2P08253 INTS4P2-202ENST00000614726 2019 ntBASIC15.59■□□□□ 0.09
MMP2P08253 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.59■□□□□ 0.09
MMP2P08253 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
MMP2P08253 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 LINC00528-201ENST00000600723 2160 ntBASIC15.59■□□□□ 0.09
MMP2P08253 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
MMP2P08253 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.59■□□□□ 0.09
MMP2P08253 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
MMP2P08253 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms