Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CTSBP07858 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSBP07858 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSBP07858 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSBP07858 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.67□□□□□ -0.06
CTSBP07858 AC148477.4-201ENST00000613430 1793 ntBASIC14.67□□□□□ -0.06
CTSBP07858 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSBP07858 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CTSBP07858 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CTSBP07858 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSBP07858 SSR4P1-203ENST00000599569 2260 ntBASIC14.67□□□□□ -0.06
CTSBP07858 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CTSBP07858 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CTSBP07858 AC093525.8-201ENST00000624099 1342 ntBASIC14.66□□□□□ -0.06
CTSBP07858 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
CTSBP07858 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSBP07858 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSBP07858 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSBP07858 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSBP07858 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 AC007787.1-201ENST00000588095 1583 ntBASIC14.66□□□□□ -0.06
CTSBP07858 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
CTSBP07858 AC005229.1-201ENST00000392885 409 ntBASIC14.66□□□□□ -0.06
CTSBP07858 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSBP07858 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
CTSBP07858 AC234783.1-201ENST00000441761 496 ntBASIC14.66□□□□□ -0.06
CTSBP07858 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 CTBP2P5-201ENST00000454986 1264 ntBASIC14.66□□□□□ -0.06
CTSBP07858 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 AC022137.2-201ENST00000503482 481 ntBASIC14.66□□□□□ -0.06
CTSBP07858 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSBP07858 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.66□□□□□ -0.06
CTSBP07858 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.66□□□□□ -0.06
CTSBP07858 AL359881.2-201ENST00000602973 570 ntBASIC14.66□□□□□ -0.06
CTSBP07858 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.66□□□□□ -0.06
CTSBP07858 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC14.66□□□□□ -0.06
CTSBP07858 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.66□□□□□ -0.06
CTSBP07858 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
CTSBP07858 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.66□□□□□ -0.06
CTSBP07858 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.66□□□□□ -0.06
CTSBP07858 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CTSBP07858 MST1L-201ENST00000442552 2185 ntBASIC14.66□□□□□ -0.06
CTSBP07858 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSBP07858 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.65□□□□□ -0.06
CTSBP07858 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
CTSBP07858 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.65□□□□□ -0.06
CTSBP07858 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.65□□□□□ -0.06
CTSBP07858 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.65□□□□□ -0.06
CTSBP07858 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CTSBP07858 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSBP07858 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSBP07858 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.65□□□□□ -0.06
CTSBP07858 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CTSBP07858 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSBP07858 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.65□□□□□ -0.06
CTSBP07858 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.65□□□□□ -0.06
CTSBP07858 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.65□□□□□ -0.06
CTSBP07858 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.65□□□□□ -0.06
CTSBP07858 AL022328.1-201ENST00000610050 478 ntBASIC14.65□□□□□ -0.06
CTSBP07858 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.65□□□□□ -0.06
CTSBP07858 BX539320.1-201ENST00000623759 877 ntBASIC14.65□□□□□ -0.06
CTSBP07858 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC14.65□□□□□ -0.06
CTSBP07858 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 AC112693.3-201ENST00000624819 1983 ntBASIC14.65□□□□□ -0.06
CTSBP07858 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.65□□□□□ -0.06
CTSBP07858 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CTSBP07858 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CTSBP07858 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.65□□□□□ -0.07
CTSBP07858 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CTSBP07858 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms