Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RTN3O95197 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN3O95197 AC134915.1-201ENST00000426461 574 ntBASIC16.44■□□□□ 0.22
RTN3O95197 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.44■□□□□ 0.22
RTN3O95197 AL162726.2-201ENST00000438986 1017 ntBASIC16.44■□□□□ 0.22
RTN3O95197 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.44■□□□□ 0.22
RTN3O95197 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN3O95197 RN7SL837P-201ENST00000463010 287 ntBASIC16.44■□□□□ 0.22
RTN3O95197 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.44■□□□□ 0.22
RTN3O95197 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN3O95197 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.44■□□□□ 0.22
RTN3O95197 AL049840.4-201ENST00000602422 811 ntBASIC16.44■□□□□ 0.22
RTN3O95197 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RTN3O95197 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RTN3O95197 IGHV3-72-202ENST00000621503 303 ntBASIC16.44■□□□□ 0.22
RTN3O95197 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RTN3O95197 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
RTN3O95197 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.44■□□□□ 0.22
RTN3O95197 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN3O95197 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
RTN3O95197 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.44■□□□□ 0.22
RTN3O95197 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.44■□□□□ 0.22
RTN3O95197 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RTN3O95197 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN3O95197 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.44■□□□□ 0.22
RTN3O95197 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.43■□□□□ 0.22
RTN3O95197 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RTN3O95197 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.43■□□□□ 0.22
RTN3O95197 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.43■□□□□ 0.22
RTN3O95197 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.43■□□□□ 0.22
RTN3O95197 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.43■□□□□ 0.22
RTN3O95197 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
RTN3O95197 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RTN3O95197 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RTN3O95197 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.43■□□□□ 0.22
RTN3O95197 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.43■□□□□ 0.22
RTN3O95197 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RTN3O95197 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.43■□□□□ 0.22
RTN3O95197 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.42■□□□□ 0.22
RTN3O95197 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
RTN3O95197 INTS4P2-202ENST00000614726 2019 ntBASIC16.42■□□□□ 0.22
RTN3O95197 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.42■□□□□ 0.22
RTN3O95197 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RTN3O95197 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.42■□□□□ 0.22
RTN3O95197 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
RTN3O95197 AC007389.4-201ENST00000454674 793 ntBASIC16.42■□□□□ 0.22
RTN3O95197 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.42■□□□□ 0.22
RTN3O95197 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC16.42■□□□□ 0.22
RTN3O95197 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms