Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.17
CDRT1O95170 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.96□□□□□ -0.17
CDRT1O95170 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.96□□□□□ -0.17
CDRT1O95170 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.96□□□□□ -0.17
CDRT1O95170 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.96□□□□□ -0.17
CDRT1O95170 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.96□□□□□ -0.17
CDRT1O95170 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CDRT1O95170 RPS2P28-201ENST00000314255 741 ntBASIC13.96□□□□□ -0.17
CDRT1O95170 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.96□□□□□ -0.17
CDRT1O95170 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
CDRT1O95170 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.96□□□□□ -0.17
CDRT1O95170 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.96□□□□□ -0.17
CDRT1O95170 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 AC092910.1-201ENST00000482027 1129 ntBASIC13.96□□□□□ -0.17
CDRT1O95170 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.96□□□□□ -0.17
CDRT1O95170 KRT18P56-201ENST00000507275 550 ntBASIC13.96□□□□□ -0.17
CDRT1O95170 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.96□□□□□ -0.17
CDRT1O95170 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC13.96□□□□□ -0.17
CDRT1O95170 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.96□□□□□ -0.17
CDRT1O95170 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CDRT1O95170 AL121912.1-201ENST00000603683 238 ntBASIC13.96□□□□□ -0.17
CDRT1O95170 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CDRT1O95170 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
CDRT1O95170 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.96□□□□□ -0.17
CDRT1O95170 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.96□□□□□ -0.17
CDRT1O95170 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CDRT1O95170 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.96□□□□□ -0.17
CDRT1O95170 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.18
CDRT1O95170 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
CDRT1O95170 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
CDRT1O95170 HSPA7-201ENST00000445535 1927 ntBASIC13.96□□□□□ -0.18
CDRT1O95170 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDRT1O95170 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.95□□□□□ -0.18
CDRT1O95170 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.95□□□□□ -0.18
CDRT1O95170 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.95□□□□□ -0.18
CDRT1O95170 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDRT1O95170 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.95□□□□□ -0.18
CDRT1O95170 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
CDRT1O95170 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.95□□□□□ -0.18
CDRT1O95170 SLC4A1APP2-201ENST00000424054 1259 ntBASIC13.95□□□□□ -0.18
CDRT1O95170 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.95□□□□□ -0.18
CDRT1O95170 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
CDRT1O95170 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
CDRT1O95170 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.95□□□□□ -0.18
CDRT1O95170 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.95□□□□□ -0.18
CDRT1O95170 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
CDRT1O95170 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.95□□□□□ -0.18
CDRT1O95170 AL031432.2-201ENST00000566714 459 ntBASIC13.95□□□□□ -0.18
CDRT1O95170 AL928711.1-201ENST00000570165 459 ntBASIC13.95□□□□□ -0.18
CDRT1O95170 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
CDRT1O95170 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC13.95□□□□□ -0.18
CDRT1O95170 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.95□□□□□ -0.18
CDRT1O95170 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CDRT1O95170 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
CDRT1O95170 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
CDRT1O95170 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.95□□□□□ -0.18
CDRT1O95170 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms