Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
UPK1BO75841 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK1BO75841 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 INTS4P1-201ENST00000438455 1935 ntBASIC13.59□□□□□ -0.23
UPK1BO75841 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
UPK1BO75841 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 TPT1P11-201ENST00000458482 498 ntBASIC13.59□□□□□ -0.23
UPK1BO75841 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
UPK1BO75841 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.59□□□□□ -0.23
UPK1BO75841 VENTXP5-201ENST00000523979 775 ntBASIC13.59□□□□□ -0.23
UPK1BO75841 AC107918.2-201ENST00000530817 355 ntBASIC13.59□□□□□ -0.23
UPK1BO75841 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 AL138966.2-201ENST00000621997 464 ntBASIC13.59□□□□□ -0.23
UPK1BO75841 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK1BO75841 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK1BO75841 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK1BO75841 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.59□□□□□ -0.23
UPK1BO75841 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.59□□□□□ -0.23
UPK1BO75841 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
UPK1BO75841 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
UPK1BO75841 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.58□□□□□ -0.23
UPK1BO75841 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
UPK1BO75841 BNIP3P1-202ENST00000550043 1585 ntBASIC13.58□□□□□ -0.23
UPK1BO75841 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
UPK1BO75841 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
UPK1BO75841 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 AC068760.1-201ENST00000493579 1953 ntBASIC13.58□□□□□ -0.24
UPK1BO75841 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.58□□□□□ -0.24
UPK1BO75841 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.58□□□□□ -0.24
UPK1BO75841 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
UPK1BO75841 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.58□□□□□ -0.24
UPK1BO75841 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC13.58□□□□□ -0.24
UPK1BO75841 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 SLC25A6P2-201ENST00000497974 877 ntBASIC13.58□□□□□ -0.24
UPK1BO75841 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.58□□□□□ -0.24
UPK1BO75841 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC13.58□□□□□ -0.24
UPK1BO75841 AL031432.5-201ENST00000641059 760 ntBASIC13.58□□□□□ -0.24
UPK1BO75841 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 AC138969.3-201ENST00000546612 1459 ntBASIC13.58□□□□□ -0.24
UPK1BO75841 AC138932.2-201ENST00000548268 1459 ntBASIC13.58□□□□□ -0.24
UPK1BO75841 AC126755.4-201ENST00000549796 1459 ntBASIC13.58□□□□□ -0.24
UPK1BO75841 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.58□□□□□ -0.24
UPK1BO75841 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
UPK1BO75841 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
UPK1BO75841 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
UPK1BO75841 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms