Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.69■□□□□ 0.1
GPC4O75487 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 AL109954.1-202ENST00000564051 2148 ntBASIC15.69■□□□□ 0.1
GPC4O75487 AC140878.1-201ENST00000565277 250 ntBASIC15.69■□□□□ 0.1
GPC4O75487 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.69■□□□□ 0.1
GPC4O75487 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
GPC4O75487 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.69■□□□□ 0.1
GPC4O75487 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
GPC4O75487 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.69■□□□□ 0.1
GPC4O75487 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC4O75487 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
GPC4O75487 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC4O75487 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 TCAF2P1-201ENST00000291129 2421 ntBASIC15.68■□□□□ 0.1
GPC4O75487 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC4O75487 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GPC4O75487 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC4O75487 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
GPC4O75487 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC4O75487 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
GPC4O75487 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
GPC4O75487 HIST3H2BA-201ENST00000436555 524 ntBASIC15.68■□□□□ 0.1
GPC4O75487 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 HLA-V-204ENST00000476601 1289 ntBASIC15.68■□□□□ 0.1
GPC4O75487 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
GPC4O75487 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC4O75487 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC4O75487 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 AL589739.1-201ENST00000607720 493 ntBASIC15.68■□□□□ 0.1
GPC4O75487 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.68■□□□□ 0.1
GPC4O75487 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC4O75487 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.68■□□□□ 0.1
GPC4O75487 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC4O75487 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
GPC4O75487 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15.68■□□□□ 0.1
GPC4O75487 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.68■□□□□ 0.1
GPC4O75487 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 CETN4P-206ENST00000642099 2168 ntBASIC15.68■□□□□ 0.1
GPC4O75487 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
GPC4O75487 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
GPC4O75487 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC4O75487 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.67■□□□□ 0.1
GPC4O75487 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
GPC4O75487 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC4O75487 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC4O75487 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC4O75487 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC4O75487 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC4O75487 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC4O75487 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC4O75487 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.67■□□□□ 0.1
GPC4O75487 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
GPC4O75487 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
GPC4O75487 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.67■□□□□ 0.1
GPC4O75487 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms