Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 AC015922.1-201ENST00000421102 1152 ntBASIC17.47■□□□□ 0.39
ACTN4O43707 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.47■□□□□ 0.39
ACTN4O43707 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 AC051619.7-201ENST00000568314 623 ntBASIC17.47■□□□□ 0.39
ACTN4O43707 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 WASH3P-207ENST00000560956 1394 ntBASIC17.47■□□□□ 0.39
ACTN4O43707 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 PCDHGB8P-201ENST00000502926 1973 ntBASIC17.47■□□□□ 0.39
ACTN4O43707 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 AP000845.1-201ENST00000581677 2131 ntBASIC17.47■□□□□ 0.39
ACTN4O43707 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.47■□□□□ 0.39
ACTN4O43707 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ACTN4O43707 TUBB3P1-201ENST00000405796 1332 ntBASIC17.47■□□□□ 0.39
ACTN4O43707 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ACTN4O43707 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 ACE3P-201ENST00000423435 1973 ntBASIC17.46■□□□□ 0.39
ACTN4O43707 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC17.46■□□□□ 0.39
ACTN4O43707 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ACTN4O43707 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ACTN4O43707 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ACTN4O43707 AL133267.1-201ENST00000398220 340 ntBASIC17.46■□□□□ 0.39
ACTN4O43707 KRT18P13-201ENST00000400056 1290 ntBASIC17.46■□□□□ 0.39
ACTN4O43707 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.46■□□□□ 0.39
ACTN4O43707 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.46■□□□□ 0.39
ACTN4O43707 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.46■□□□□ 0.39
ACTN4O43707 CNN2P2-201ENST00000443536 909 ntBASIC17.46■□□□□ 0.39
ACTN4O43707 CNN2P3-201ENST00000450201 906 ntBASIC17.46■□□□□ 0.39
ACTN4O43707 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC17.46■□□□□ 0.39
ACTN4O43707 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.46■□□□□ 0.39
ACTN4O43707 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.46■□□□□ 0.39
ACTN4O43707 RN7SL602P-201ENST00000578326 324 ntBASIC17.46■□□□□ 0.39
ACTN4O43707 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 AL136317.3-201ENST00000618497 906 ntBASIC17.46■□□□□ 0.39
ACTN4O43707 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.46■□□□□ 0.39
ACTN4O43707 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ACTN4O43707 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC17.46■□□□□ 0.39
ACTN4O43707 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.46■□□□□ 0.39
ACTN4O43707 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.46■□□□□ 0.39
ACTN4O43707 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
ACTN4O43707 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.46■□□□□ 0.38
ACTN4O43707 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.38
ACTN4O43707 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.38
ACTN4O43707 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
ACTN4O43707 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.45■□□□□ 0.38
ACTN4O43707 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.45■□□□□ 0.38
ACTN4O43707 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC17.45■□□□□ 0.38
ACTN4O43707 TOMM22P5-201ENST00000416399 439 ntBASIC17.45■□□□□ 0.38
ACTN4O43707 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.45■□□□□ 0.38
ACTN4O43707 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.45■□□□□ 0.38
ACTN4O43707 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ACTN4O43707 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ACTN4O43707 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.45■□□□□ 0.38
ACTN4O43707 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ACTN4O43707 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms