Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
RIPK2O43353 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RIPK2O43353 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 AC126755.1-201ENST00000525846 6405 ntBASIC15.84■□□□□ 0.13
RIPK2O43353 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
RIPK2O43353 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
RIPK2O43353 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RIPK2O43353 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 MYO15B-237ENST00000642007 4893 ntBASIC15.84■□□□□ 0.13
RIPK2O43353 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
RIPK2O43353 AP001267.2-201ENST00000532619 2086 ntBASIC15.84■□□□□ 0.13
RIPK2O43353 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.84■□□□□ 0.13
RIPK2O43353 AL135744.1-201ENST00000565098 629 ntBASIC15.84■□□□□ 0.13
RIPK2O43353 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.84■□□□□ 0.13
RIPK2O43353 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.84■□□□□ 0.13
RIPK2O43353 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.84■□□□□ 0.13
RIPK2O43353 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.84■□□□□ 0.13
RIPK2O43353 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC15.84■□□□□ 0.13
RIPK2O43353 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.84■□□□□ 0.13
RIPK2O43353 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.84■□□□□ 0.13
RIPK2O43353 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RIPK2O43353 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
RIPK2O43353 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
RIPK2O43353 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
RIPK2O43353 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RIPK2O43353 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.83■□□□□ 0.13
RIPK2O43353 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
RIPK2O43353 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
RIPK2O43353 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
RIPK2O43353 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.83■□□□□ 0.12
RIPK2O43353 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RIPK2O43353 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 HLA-H-201ENST00000383620 1096 ntBASIC15.83■□□□□ 0.12
RIPK2O43353 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.83■□□□□ 0.12
RIPK2O43353 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.83■□□□□ 0.12
RIPK2O43353 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.83■□□□□ 0.12
RIPK2O43353 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.83■□□□□ 0.12
RIPK2O43353 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.83■□□□□ 0.12
RIPK2O43353 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.83■□□□□ 0.12
RIPK2O43353 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.83■□□□□ 0.12
RIPK2O43353 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.83■□□□□ 0.12
RIPK2O43353 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.83■□□□□ 0.12
RIPK2O43353 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.83■□□□□ 0.12
RIPK2O43353 AC026979.3-201ENST00000607315 403 ntBASIC15.83■□□□□ 0.12
RIPK2O43353 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
RIPK2O43353 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RIPK2O43353 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.83■□□□□ 0.12
RIPK2O43353 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.83■□□□□ 0.12
RIPK2O43353 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
RIPK2O43353 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.83■□□□□ 0.12
RIPK2O43353 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.83■□□□□ 0.12
RIPK2O43353 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
RIPK2O43353 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
RIPK2O43353 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC15.82■□□□□ 0.12
RIPK2O43353 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.82■□□□□ 0.12
RIPK2O43353 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.82■□□□□ 0.12
RIPK2O43353 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.82■□□□□ 0.12
RIPK2O43353 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.82■□□□□ 0.12
RIPK2O43353 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
RIPK2O43353 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms