Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
PHGDHO43175 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC15.55■□□□□ 0.08
PHGDHO43175 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC15.55■□□□□ 0.08
PHGDHO43175 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
PHGDHO43175 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.55■□□□□ 0.08
PHGDHO43175 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
PHGDHO43175 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC15.55■□□□□ 0.08
PHGDHO43175 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.55■□□□□ 0.08
PHGDHO43175 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
PHGDHO43175 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.54■□□□□ 0.08
PHGDHO43175 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.54■□□□□ 0.08
PHGDHO43175 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.54■□□□□ 0.08
PHGDHO43175 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.54■□□□□ 0.08
PHGDHO43175 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.54■□□□□ 0.08
PHGDHO43175 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.54■□□□□ 0.08
PHGDHO43175 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 TARDBPP1-201ENST00000442013 1203 ntBASIC15.54■□□□□ 0.08
PHGDHO43175 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.54■□□□□ 0.08
PHGDHO43175 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 AC112482.1-201ENST00000492080 688 ntBASIC15.54■□□□□ 0.08
PHGDHO43175 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.54■□□□□ 0.08
PHGDHO43175 AP000344.2-201ENST00000512987 629 ntBASIC15.54■□□□□ 0.08
PHGDHO43175 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PHGDHO43175 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
PHGDHO43175 AC004835.2-201ENST00000603762 682 ntBASIC15.54■□□□□ 0.08
PHGDHO43175 AC007967.4-201ENST00000614700 386 ntBASIC15.54■□□□□ 0.08
PHGDHO43175 MIR6080-201ENST00000617359 66 ntBASIC15.54■□□□□ 0.08
PHGDHO43175 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.54■□□□□ 0.08
PHGDHO43175 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
PHGDHO43175 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 AC084364.1-201ENST00000551967 1556 ntBASIC15.53■□□□□ 0.08
PHGDHO43175 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.53■□□□□ 0.08
PHGDHO43175 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PHGDHO43175 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PHGDHO43175 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.53■□□□□ 0.08
PHGDHO43175 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
PHGDHO43175 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.53■□□□□ 0.08
PHGDHO43175 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
PHGDHO43175 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
PHGDHO43175 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
PHGDHO43175 FO393414.2-201ENST00000405153 598 ntBASIC15.53■□□□□ 0.08
PHGDHO43175 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.53■□□□□ 0.08
PHGDHO43175 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.53■□□□□ 0.08
PHGDHO43175 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.53■□□□□ 0.08
PHGDHO43175 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC15.53■□□□□ 0.08
PHGDHO43175 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.53■□□□□ 0.08
PHGDHO43175 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.53■□□□□ 0.08
PHGDHO43175 MIR4453-201ENST00000584019 89 ntBASIC15.53■□□□□ 0.08
PHGDHO43175 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC15.53■□□□□ 0.08
PHGDHO43175 AC009093.7-201ENST00000623853 1223 ntBASIC15.53■□□□□ 0.08
PHGDHO43175 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
PHGDHO43175 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms