Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PCDH17O14917 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
PCDH17O14917 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 AL109954.1-202ENST00000564051 2148 ntBASIC14.93□□□□□ -0.02
PCDH17O14917 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
PCDH17O14917 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
PCDH17O14917 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
PCDH17O14917 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH17O14917 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH17O14917 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
PCDH17O14917 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
PCDH17O14917 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
PCDH17O14917 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDH17O14917 RN7SL692P-201ENST00000464677 288 ntBASIC14.92□□□□□ -0.02
PCDH17O14917 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH17O14917 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDH17O14917 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.92□□□□□ -0.02
PCDH17O14917 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDH17O14917 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.92□□□□□ -0.02
PCDH17O14917 AC004461.2-201ENST00000629517 803 ntBASIC14.92□□□□□ -0.02
PCDH17O14917 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 AC007541.1-201ENST00000570282 1469 ntBASIC14.92□□□□□ -0.02
PCDH17O14917 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.92□□□□□ -0.02
PCDH17O14917 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.92□□□□□ -0.02
PCDH17O14917 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
PCDH17O14917 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
PCDH17O14917 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
PCDH17O14917 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDH17O14917 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.91□□□□□ -0.02
PCDH17O14917 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.91□□□□□ -0.02
PCDH17O14917 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH17O14917 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.91□□□□□ -0.02
PCDH17O14917 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
PCDH17O14917 AL109936.8-201ENST00000641772 604 ntBASIC14.91□□□□□ -0.02
PCDH17O14917 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.91□□□□□ -0.02
PCDH17O14917 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
PCDH17O14917 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms