Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TMEM88BA6NKF7 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 AC022188.1-201ENST00000620960 1664 ntBASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 GCSHP3-201ENST00000431120 391 ntBASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 MIR4313-201ENST00000580760 101 ntBASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 AC068880.1-201ENST00000507289 2297 ntBASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.71■□□□□ 0.43
TMEM88BA6NKF7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM88BA6NKF7 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
TMEM88BA6NKF7 MRPL37P1-201ENST00000592451 1337 ntBASIC17.71■□□□□ 0.42
TMEM88BA6NKF7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM88BA6NKF7 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM88BA6NKF7 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
TMEM88BA6NKF7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 AZGP1P1-202ENST00000425474 1181 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 RN7SL396P-201ENST00000471086 295 ntBASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 AC002472.4-201ENST00000641915 272 ntBASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 AC244394.1-201ENST00000435000 1665 ntBASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
TMEM88BA6NKF7 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TMEM88BA6NKF7 MIR557-201ENST00000385239 98 ntBASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms