Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 MAP3K9-205ENST00000554752 11169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 AC068338.2-201ENST00000563278 1430 ntBASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 COX20-201ENST00000366528 568 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ABHD17AP6-201ENST00000458502 1044 ntBASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 EHF-205ENST00000527935 557 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 AC008694.1-202ENST00000636953 945 ntBASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 NBN-203ENST00000409330 4523 ntTSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 DDO-201ENST00000368923 1953 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ROBO1-213ENST00000618846 7483 ntTSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 COL1A1-201ENST00000225964 6727 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 AGAP6-202ENST00000412531 2372 ntAPPRIS P2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 DNM1-213ENST00000628346 3835 ntAPPRIS ALT1 TSL 5 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 ZNF740-201ENST00000416904 8578 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC7.98□□□□□ -1.13
LINC01558Q9Y6Z2 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 BEND6-202ENST00000370746 2379 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
LINC01558Q9Y6Z2 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms