Protein–RNA interactions for Protein: Q9Y5U2

TSSC4, Protein TSSC4, humanhuman

Predicted RBP Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4Q9Y5U2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC12.29□□□□□ -0.44
TSSC4Q9Y5U2 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AC098850.1-201ENST00000419919 790 ntBASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AL442647.2-201ENST00000429864 857 ntBASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 KRT17P8-201ENST00000540749 863 ntBASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 RAB43P1-201ENST00000561790 589 ntBASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AC133539.2-201ENST00000604757 467 ntBASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AL158212.4-201ENST00000624062 1286 ntBASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 PAUPAR-201ENST00000630360 2965 ntBASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AC144831.1-201ENST00000573312 2656 ntBASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AC022188.1-201ENST00000620960 1664 ntBASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 BANP-203ENST00000393207 2438 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TSSC4Q9Y5U2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 REXO1L1P-202ENST00000608646 1974 ntBASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
TSSC4Q9Y5U2 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TSSC4Q9Y5U2 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
TSSC4Q9Y5U2 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.27□□□□□ -0.45
TSSC4Q9Y5U2 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.27□□□□□ -0.45
TSSC4Q9Y5U2 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
TSSC4Q9Y5U2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms