Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 AC091607.1-201ENST00000490318 1060 ntBASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 AC096582.2-201ENST00000510860 516 ntBASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 RN7SL510P-201ENST00000581311 263 ntBASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 AL732292.2-201ENST00000609649 430 ntBASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 AC114341.1-201ENST00000618070 349 ntBASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 AC148477.5-201ENST00000625164 1645 ntBASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
LRCH1Q9Y2L9 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 AC127383.1-201ENST00000444697 1800 ntBASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 LINC00982-205ENST00000420957 435 ntBASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 BNIP3P18-201ENST00000593976 575 ntBASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.89□□□□□ -0.03
LRCH1Q9Y2L9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms