Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 MIR4754-201ENST00000582477 89 ntBASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 OR10B1P-201ENST00000601666 907 ntBASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 AC087045.2-201ENST00000606279 1003 ntBASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZC3H4Q9UPT8 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 AL139094.1-201ENST00000405549 1188 ntBASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 RPL18P13-201ENST00000478088 569 ntBASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 AC092171.5-201ENST00000608012 942 ntBASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 AC051619.9-201ENST00000623237 597 ntBASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 AC009084.3-201ENST00000623356 437 ntBASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 AC068587.8-201ENST00000641239 219 ntBASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZC3H4Q9UPT8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZC3H4Q9UPT8 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
ZC3H4Q9UPT8 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZC3H4Q9UPT8 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZC3H4Q9UPT8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
ZC3H4Q9UPT8 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 ISCA2P1-201ENST00000425548 448 ntBASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AC097065.1-201ENST00000425737 517 ntBASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AC078991.1-201ENST00000437297 610 ntBASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AP003171.2-201ENST00000528208 925 ntBASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 NEU3-205ENST00000531619 582 ntTSL 5 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 RTN3P1-201ENST00000536295 711 ntBASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AC005324.6-201ENST00000587972 613 ntBASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 AC134407.2-201ENST00000625089 1978 ntBASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZC3H4Q9UPT8 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 KRT8P4-201ENST00000509735 1454 ntBASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZC3H4Q9UPT8 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 59 ms